YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MAD2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKTAAAKD IITLHGSAAI VSEFFCYAAN SILYNRAVYP EESFVKVKKY GLPMLLIEDE  60
   61 SVKSFMSNLT SQISEWLEAG KLQRVVLVIM SKATGEVLER WNFRIETDNE VVDKGVSREK 120
  121 SDKEIMREIQ AIMRQVASSV TYLPCLDETC VFDVLAYTDT DVAVPFTWIE SDPKLIANPQ 180
  181 MVKLHGFDTK IHKVDTLVSY KNDEWDEEE

Type	Start	End	Confidence
Signal Peptide	1	28	0.44
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	209	0.98