YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLVRVARS SSLFGFGNRF YSTSAEASHA SSPSPFLHGG GASRVAPKDR NVQWVFLGCP  60
   61 GVGKGTYASR LSTLLGVPHI ATGDLVREEL ASSGPLSQKL SEIVNQGKLV SDEIIVDLLS 120
  121 KRLEAGEARG ESGFILDGFP RTMRQAEILG DVTDIDLVVN LKLPEEVLVD KCLGRRTCSQ 180
  181 CGKGFNVAHI NLKGENGRPG ISMDPLLPPH QCMSKLVTRA DDTEEVVKAR LRIYNETSQP 240
  241 LEEYYRTKGK LMEFDLPGGI PESWPRLLEA LRLDDYEEKQ SVAA

Type	Start	End	Confidence
Signal Peptide	1	25	0.62
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	284	0.99