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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VIPP1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKASPVTG LFPPLRPTAS SSPSTSSNRP CSLRILPLRT SFFGNSSGAL RVNVLRLACD  60
   61 NRLRCNGHGA TMNLFERFSR VVKSYANALI SSFEDPEKIL EQTVIEMNSD LTKMRQATAQ 120
  121 VLASQKQLQN KYKAAQQSSD DWYKRAQLAL AKGDEDLARE ALKRRKSFAD NATALKTQLD 180
  181 QQKGVVDNLV SNTRLLESKI QEAKAKKDTL LARARTAKTA TKVQEMIGTV NTSGALSAFE 240
  241 KMEEKVMAME SEADALTQIG TDELEGKFQM LETSSVDDDL ADLKKELSGS SKKGELPPGR 300
  301 STVAASTRYP FKDSEIENEL NELRRKANDF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle