YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EIF3F_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI  60
   61 LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV NSKETIVGWY STGAGVNGGS 120
  121 SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMVD 180
  181 AERVGFDVLK ATSVDKLPND LEGMELTMER LLTLINDVYK YVDSVVGGQI APDNNIGRFI 240
  241 ADAVASLPKL PPQVFDNLVN DSLQDQLLLL YLSSITRTQL SLAEKLNTAA QML

Type	Start	End	Confidence
Signal Peptide	1	21	0.60
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	293	0.98