YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IDI2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASSLFNLP LIRLRSLALS SSFSSFRFAH RPLSSISPRK LPNFRAFSGT AMTDTKDAGM  60
   61 DAVQRRLMFE DECILVDETD RVVGHDSKYN CHLMENIEAK NLLHRAFSVF LFNSKYELLL 120
  121 QQRSNTKVTF PLVWTNTCCS HPLYRESELI QDNALGVRNA AQRKLLDELG IVAEDVPVDE 180
  181 FTPLGRMLYK APSDGKWGEH ELDYLLFIVR DVKVQPNPDE VAEIKYVSRE ELKELVKKAD 240
  241 AGEEGLKLSP WFRLVVDNFL MKWWDHVEKG TLVEAIDMKT IHKL

Type	Start	End	Confidence
Signal Peptide	1	29	0.92
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	284	0.99