YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HIS5A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSSASAIL SHSSSAAQLL RPKLGFIDLL PRRAMIVSSP SSSLPRFLRM ESQSQLRQSI  60
   61 SCSASSSSSM ALGRIGEVKR VTKETNVSVK INLDGTGVAD SSSGIPFLDH MLDQLASHGL 120
  121 FDVHVRATGD VHIDDHHTNE DIALAIGTAL LKALGERKGI NRFGDFTAPL DEALIHVSLD 180
  181 LSGRPYLGYN LEIPTQRVGT YDTQLVEHFF QSLVNTSGMT LHIRQLAGEN SHHIIEATFK 240
  241 AFARALRQAT ETDPRRGGTI PSSKGVLSRS

Type	Start	End	Confidence
Signal Peptide	1	16	0.97
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	270	0.99