YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSHB_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGCSSLSY SSSSTCNATV FSISSSPSSS SSLKLNPSSF LFQNPKTLRN QSPLRCGRSF  60
   61 KMESQKPIFD LEKLDDEFVQ KLVYDALVWS SLHGLVVGDK SYQKSGNVPG VGLMHAPIAL 120
  121 LPTAFPEAYW KQACNVTPLF NELIDRVSLD GKFLQDSLSR TKKVDVFTSR LLDIHSKMLE 180
  181 RNKKEDIRLG LHRFDYMLDE ETNSLLQIEM NTISCSFPGL SRLVSQLHQS LLRSYGDQIG 240
  241 IDSERVPINT STIQFADALA KAWLEYSNPR AVVMVIVQPE ERNMYDQHLL SSILREKHNI 300
  301 VVIRKTLAEV EKEGSVQEDE TLIVGGQAVA VVYFRSGYTP NDHPSESEWN ARLLIEESSA 360
  361 VKCPSIAYHL TGSKKIQQEL AKPGVLERFL DNKEDIAKLR KCFAGLWSLD DSEIVKQAIE 420
  421 KPGLFVMKPQ REGGGNNIYG DDVRENLLRL QKEGEEGNAA YILMQRIFPK VSNMFLVREG 480
  481 VYHKHQAISE LGVYGAYLRS KDEVIVNEQS GYLMRTKIAS SDEGGVAAGF GVLDSIYLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle