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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATLTGSGT ALGFSCSSKI SKRVSSSPAS NRCCIKMSVS VDEKKKSFSL QKSEEAFNAA  60
   61 KNLMPGGVNS PVRAFKSVGG QPVLIDSVKG SKMWDIDGNE YIDYVGSWGP AIIGHADDEV 120
  121 LAALAETMKK GTSFGAPCLL ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTN 180
  181 KEKFIKFEGC YHGHANAFLV KAGSGVATLG LPDSPGVPKA ATSDTLTAPY NDLEAVEKLF 240
  241 AAHKGEISAV ILEPVVGNSG FIPPTPEFIN GLRQLTKDNG VLLIFDEVMT GFRLAYGGAQ 300
  301 EYFGITPDLT TLGKIIGGGL PVGAYGGRRD IMEMVAPAGP MYQAGTLSGN PLAMTAGIHT 360
  361 LKRLKQAGTY EYLDKITKEL TNGILEAGKK TGHPMCGGYI SGMFGFFFAE GPVYNFADSK 420
  421 KSDTEKFGRF FRGMLEEGVY FAPSQFEAGF TSLAHTPEDI QLTIAAAERV LSRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle