YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GOS11_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVPSSWDAL RKQARKIEAQ LDEQMHSYRR LVSTKALSKS DGNESDLEAG IDLLLRQLQQ  60
   61 VNAQMQAWVS SGGSEMVSHT LTRHQEILQD LTQEFYRHRS SLRAKQEHAS LLEDFREFDR 120
  121 TRLDLEDGYG SEQALIKEHM GINRNTAQMD GVISQAQATL GTLVFQRSTF GGINSKLSNV 180
  181 ASRLPTVNTI LAAIKRKKSM DTIILSLVAA VCTFLIFIYW ITK

Type	Start	End	Confidence
Cytoplasmic	1	201	0.95
Transmembrane Helix	202	221	0.96
Non-Cytoplasmic	222	223	0.77