YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RBG2_ARATH
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD  60
   61 VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE LNGRHIRVNP ANDRPSAPRA 120
  121 YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF

Type	Start	End	Confidence
Cytoplasmic	1	123	0.56
Transmembrane Helix	124	142	0.53
Non-Cytoplasmic	143	158	0.86