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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR37_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN  60
   61 DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI GPISSSVAHT ISDIAKGLHF 120
  121 PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV 180
  181 SALDDELYKK RSRISYKVPL SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA 240
  241 QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN 300
  301 RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL 360
  361 LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV HTVGFWSKNG GFSVVAPKTR 420
  421 HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS 480
  481 HRIQGFCIDV FIEALKFVPY SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV 540
  541 PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE 600
  601 HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN 660
  661 LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT YSLGMARSRL VPLDSTEEYE 720
  721 KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS 780
  781 TAILKLSETR KLQEIRKKWL CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV 840
  841 FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD 900
  901 DSNNNPSHVG EVQADTEVPR N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle