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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR36_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS  60
   61 PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG PQRSTTARVV AHVATELKIP 120
  121 ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA 180
  181 ALGDRLSEKR CRISYKAALP PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR 240
  241 NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN 300
  301 LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG 360
  361 GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG TGYTTIGYWF NHSGLSVMPA 420
  421 DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI 480
  481 TGFCVDVFIA AINLLPYAVP FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER 540
  541 TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK 600
  601 HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT 660
  661 SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE LNIHVSRLVP LRSPEEYDKA 720
  721 LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI 780
  781 LQLSENGDMQ RIRDKWLLRK ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL 840
  841 MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS 900
  901 RCN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle