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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR35_ARATH
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI  60
   61 GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV GTMGALQLME NKVVAAIGPQ 120
  121 SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW 180
  181 REVVAIFVDD EYGRNGISVL GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI 240
  241 FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR 300
  301 HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT 360
  361 FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG LTGQIEFNSE KNRINPAYDI 420
  421 LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF 480
  481 PENGKPLKIG VPNRVSYKNY ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK 540
  541 KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS 600
  601 FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHRE 660
  661 NTVSTLGRFV LLVWLFVVLI INSSYTASLT SILTVQQLTS RIEGMDTLIA SNEPIGVQDG 720
  721 TFAWKFLVNE LNIAPSRIIP LKDEEEYLSA LQRGPRGGGV AAIVDELPYI KALLSNSNCK 780
  781 FRTVGQEFTR TGWGFAFQRD SPLAVDMSTA ILQLAEEGKL EKIRKKWLTY DHECTMQISD 840
  841 TENYQISVQS FWGLFLICGV VWFIALTLFC WKVFWQYQRL RPEESDEVQA RSEEAGSSRG 900
  901 KSLRAVSFKD LIKVVDKREA EIKEMLKEKS SKKLKDGQSS AENSQSKDHE TPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle