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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR33_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP  60
   61 DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP QCSVVAHMIS HMANELRVPL 120
  121 LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA 180
  181 LNDKLASRRL RITYKAGLHP DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA 240
  241 KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR 300
  301 KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT 360
  361 VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII NVAGTGVRQI GYWSNHSGLS 420
  421 TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV 480
  481 SQIRGTENMF KGFCIDVFTA AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV 540
  541 VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV 600
  601 GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI 660
  661 INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG SFAESYLRNE LNISESRLVP 720
  721 LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS 780
  781 PLAIDLSTAI LELAENGDLQ RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC 840
  841 LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK 900
  901 KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle