YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR32_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD  60
   61 PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG PQTSIMAHVL SHLANELSVP 120
  121 MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT 180
  181 ALGDELEGRR CKISYKAVLP LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE 240
  241 EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR 300
  301 WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA 360
  361 LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD IINVVDDGFR QIGYWSNHSG 420
  421 LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE 480
  481 FVSRLDGSNK VQGYAIDVFE AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA 540
  541 VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI 600
  601 VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL 660
  661 IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV GSYAENYMID ELNIARSRLV 720
  721 PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA 780
  781 IDMSTAILGL SETGQLQKIH DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC 840
  841 FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR 900
  901 NDDLSLKPSR PI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle