YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR29_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD  60
   61 HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG PINSMQADFM IKLANKTQVP 120
  121 TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP 180
  181 FLFDALQDVE VKRSVIPPEA IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG 240
  241 MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE 300
  301 NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS 360
  361 LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER IIGFWTPRDG LMDATSSNKK 420
  421 TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF 480
  481 EAALKELPYL VIPEYVSFES PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT 540
  541 ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ 600
  601 YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP 660
  661 TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF DSAKDADDLL SKGKSKGIAA 720
  721 AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ 780
  781 IEDRWFPKKN DCPDPMTALS SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG 840
  841 DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS 900
  901 QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle