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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR26_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.75
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFNHLLSR ALPLWLLFFI NFLVLLGKSQ QEVLQVQVGI VLDTNATLAA LSLRAINMSL  60
   61 SEFYNTHNGF KTRIVLNIRD SKRTVVGAAA SALYLIKKRE VVAIIGPGNS MQAPFLINLG 120
  121 NQSQVPIISF SASSPVLDSL RSPYFIRATH DDSSQVHAIS AIIESFRWRE VVPIYADNEF 180
  181 GEGILPYLVD AFQEINVRIR YRSAISVHST DDLVKKELYK LMTMPTRVFI VHMLPDLGSR 240
  241 LFSIAKEIGM MTKGYVWIVT NGIADQMSVM GESSLENMHG VLGVKTYFSR SKELMYLETR 300
  301 WRKRFGGEEL NNFECWGYDT ATALAMSIEE ISSNVNMSFS QTKRNTSRDD TGTDLDDLSF 360
  361 ALSGPKLLQA LATVSFKGVA GRFQLKNGKL EATTFKIVNI EESGERTVGF WKSKVGLVKS 420
  421 LRVNQTGIKI SHSSHRLRPI IWPGDTIFVP KGWEFPTNAK KLRIAVPKKD GFNNFVEVTK 480
  481 DANTNAPTIT GFCIDVFDTA MRQMPYAVPY EYIPFETPDG KPRGSYDEMV YHVFLGEFDG 540
  541 AVGDTTILAN RSTYVDFALP YSETGIVVVV PVKDEREKGK WVFLKPLTRE LWFLTAASFL 600
  601 YIGIMVWIFE YQASGDFRKQ SIINKISNVF YFSFSTLFFA HMRPSESIFT RVLVVVWCFV 660
  661 LLILTQSYTA TLTSMLTVQE LRPTVRHMDD LRNSGVNIGY QTGSFTFERL KQMGYKESRL 720
  721 KTYDTPQEMH ELFLKKSSNG GIDAAFDEVA YVKLFMAKYC SKYTIIEPTF KADGFGFAFP 780
  781 LGSPLVPDLS RQILNITEGE TMKAIENKWL LGEKHCLDST TSDSPIRLDH HSFEALFTIV 840
  841 FVVSMLLLLA MLVCRRYRQE SKSGEINANN SPTDGNMRAP PNQPTDDNMR APTSPPIDDQ 900
  901 VLEPPGPALN EADDQDQLLN DEVNVGDRNE VDIIVEVDPT LVHRRNLITS KTIPTRRAAL 960
  961 FSRIKSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle