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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR25_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFHHLVSR FLSLWLLIFL VFLVLSLGKS QKEALQVKVG IVLGSNVTLA DLSLRAINMS  60
   61 LSEFYNTHNG FKTRIVLNVR DSKQTVVGAA ASALYLIKKR EVVAIIGPGT SMQAPFLINL 120
  121 GNQSKVPIIS FSATSPLLDS LRSPYFIRAT HDDSSQVQAI SAIIESFRWR EVVPIYVDNE 180
  181 FGEGILPNLV DAFQEINVRI RYRSAISLHY SDDQIKKELY KLMTMPTRVF IVHMLPDLGS 240
  241 RLFSIAKEID MLSKGYVWIV TNGIADLMSI MGESSLVNMH GVLGVKTYFA KSKELLHLEA 300
  301 RWQKRFGGEE LNNFACWAYD AATALAMSVE EIRHVNMSFN TTKEDTSRDD IGTDLDELGV 360
  361 ALSGPKLLDA LSTVSFKGVA GRFQLKNGKL EATTFKIINI EESGERTVGF WKSKVGLVKS 420
  421 LRVDKVSHSS RRLRPIIWPG DTIFVPKGWE FPTNAKKLRI AVPKKDGFNN FVEVTKDENT 480
  481 NVPTVTGFCI DVFNTVMSQM PYAVSYEYIP FDTPDGKPRG SYDEMVYNVF LGEFDGAVGD 540
  541 TTILANRSHY VDFALPYSET GIVFLVPVKD GKEKGEWVFL KPLTKELWLV TAASFLYIGI 600
  601 MVWIFEYQAD EEFREQMIID KISSVFYFSF STLFFAHRRP SESFFTRVLV VVWCFVLLIL 660
  661 TQSYTATLTS MLTVQELRPT VRHMDDLRKS GVNIGYQTGS FTFERLKQMR FDESRLKTYN 720
  721 SPEEMRELFL HKSSNGGIDA AFDEVAYIKL FMAKYCSEYS IIEPTFKADG FGFAFPLGSP 780
  781 LVSDISRQIL NITEGDAMKA IENKWFLGEK HCLDSTTSDS PIQLDHHSFE ALFLIVFVVS 840
  841 VILLLLMLAS RGYQERQHNA SPNLPNDQAN AAQEEVNEEG NVGDHIVEVD TALVRRKKLT 900
  901 SNTIPIRRVA PLSRLKSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle