YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR24_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRHLNDVVL VFLVFIFGVK LGKGQNTTIQ VINVGVVTDV GTTASNLSLL AINMSLSDFY  60
   61 SSRPESRTRL LLNFADSRDD VVGAAAAALD LIKNKEVKAI LGPRTTMQAS FVIEVGQKSQ 120
  121 VPIISFSATS PFLDSGRSPY FFRSTYDDSS QVQAISEIIK VFGWREVVPV YENNAFGEGI 180
  181 MPGLTDALQA INIRIPYRTV ISPNATDDEI SVDLLKLMTK PTRVFVVHMN RFLASRVFSK 240
  241 ARETGLMKQG YAWILTNGVI DHLVLMNGTD IEAMQGVIGI RTHFPISEEL QTFRSRLAKA 300
  301 FPVSELNIYG LRAYDATTAL AMAVEEAGTT NLTFSKMDGR NISDLEALSV SEYGPKLIRS 360
  361 LSQIQFKGLS GDYHFVDGQL HASVFEIVNV IDGGGILVGF WTQDKGLVKD LSPSSGTTRT 420
  421 FSSWKNHLNP ILWPGITLTV PKGWEIPTNG KELQIGVPVG TFPQFVKVTT DPLTHETIVT 480
  481 GFCIDFFEAV IQAMPYDVSH RFIPFGDDDG KTNVFDAVVG DTTILANRSS YVDFTLPYTT 540
  541 SGVGMVVPLK DNVARSSLIF FKPLTPGLWG MTLGSFFVVG FVVWILEHRV NSEFTGPPQY 600
  601 QISTMFWFAF SIMVFAPRER VMSFTARVVV ITWYFIVLVL TQSYTASLSS LLTTQQLNPT 660
  661 ETSIKNVLAK GGPVAYQRDS FVLGKLRESG FPESRLVPFT SPEKCEELLN KGPSKGGVSA 720
  721 AFMEVPYVRV FLGQYCKKYK MVEVPFDVDG FGFVFPIGSP LVADVSRAIL KVAESNKATQ 780
  781 LETAWFKNID KTCPDPMNNP DPNPTVSFRK LSLDSFLLLF VAAATVCTLA LLKFVICFLI 840
  841 QNRIILNDEF YRGKRMKEMW LKFMESDGES YISRVRSTCP QVLIQPREED IDPING

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle