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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR23_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTEKLFFCI LLVFFFCLEF NRGQNNGKTL VDVGVVTDVD TSHSKVVMLC INMSISDFYS  60
   61 SNPQFETRLV VNVGDSKSDV VGAAIAALDL IKNKQVKAIL GPWTSMQAHF LIEIGQKSRV 120
  121 PIVSYSATSP ILTSLRSPYF LRATYEDSFQ VQPIKAIIKL FGWREVVPVY IDNTFGEGIM 180
  181 PRLTDALQDI NVRIPYRSVI AINATDHEIS VELLKMMNMP TRVFLVHMYY DLASRFFIKA 240
  241 KELGLMEPGY VWILTNGVID DLSLINETAV EAMEGVLGIK TYIPKSPDLE KFRSRWRSLF 300
  301 PRVELSVYGL WAYDATTALA VAIEEAGTNN MTFSKVVDTG RNVSELEALG LSQFGPKLLQ 360
  361 TLLTVQFRGL AGEFRFFRGQ LQPSVFEIVN IINTGEKSIG FWKEGNGLVK KLDQQASSIS 420
  421 ALSTWKDHLK HIVWPGEADS VPKGWQIPTK GKKLRIGVPK RTGYTDLVKV TRDPITNSTV 480
  481 VTGFCIDFFE AVIRELPYDV SYEFIPFEKP DGKTAGNYND LVYQVYLGRY DAVVGDTTIL 540
  541 VNRSSYVDFT FPFIKSGVGL IVEMTDPVKR DYILFMKPLS WKLWLTSFIS FFLVGCTVWV 600
  601 LEYKRNPDFS GPPRFQASTI CWFAFSTMVF APRERVFSFW ARALVIAWYF LVLVLTQSYT 660
  661 ASLASLLTSQ KLNPTITSMS SLLEKGETVG YQRTSFILGK LKERGFPQSS LVPFDTAEEC 720
  721 DELLSKGPKK GGVSGAFLEI PYLRLFLGQF CNTYKMVEEP FNVDGFGFVF PIGSPLVADV 780
  781 SRAILKVAES PKAMELERAW FKKKEQSCPD PITNPDPNPS FTSRQLDIDS FLFLFVGVLL 840
  841 VCVMALGNFT YCFLAKDQVS YLDKVEMSPC SSSQQMPVKR KTQLNMSQVH DQDSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle