YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR22_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY  60
   61 SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI LGPWTSMQAH FLIEIGQKSR 120
  121 VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI 180
  181 MPRLTDSLQD INVRIPYRSV IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK 240
  241 AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR 300
  301 FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ 360
  361 TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG FWTEGNGLVK KLDQEPRSIG 420
  421 TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV 480
  481 VKGFCIDFFE AVIQAMPYDV SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL 540
  541 ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT 600
  601 LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT 660
  661 ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK LNETGFPQSS LVPFDTAEEC 720
  721 DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV 780
  781 SRAILKVAES PKAVELEHAW FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV 840
  841 VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY 900
  901 GMELRVRNIV QVNQTDPDCL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle