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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR21_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRENNLVLS LLFFVIVFLM QVGEAQNRIT NVNVGIVNDI GTAYSNMTLL CINMSLSDFY  60
   61 SSHPETQTRL VTTVVDSKND VVTAAAAALD LITNKEVKAI LGPWTSMQAQ FMIEMGQKSQ 120
  121 VPIVTYSATS PSLASIRSQY FFRATYDDSS QVHAIKEIIK LFGWREVAPV YVDDTFGEGI 180
  181 MPRLTDVLQE INVRIPYRTV ISPNATDDEI SVELLRMMTL PTRVFVVHLV ELLASRFFAK 240
  241 ATEIGLMKQG YVWILTNTIT DVLSIMNETE IETMQGVLGV KTYVPRSKEL ENFRSRWTKR 300
  301 FPISDLNVYG LWAYDATTAL ALAIEEAGTS NLTFVKMDAK RNVSELQGLG VSQYGPKLLQ 360
  361 TLSRVRFQGL AGDFQFINGE LQPSVFEIVN VNGQGGRTIG FWMKEYGLFK NVDQKPASKT 420
  421 TFSSWQDRLR PIIWPGDTTS VPKGWEIPTN GKRLQIGVPV NNTFQQFVKA TRDPITNSTI 480
  481 FSGFSIDYFE AVIQAIPYDI SYDFIPFQDG GYDALVYQVY LGKYDAVVAD TTISSNRSMY 540
  541 VDFSLPYTPS GVGLVVPVKD SVRRSSTIFL MPLTLALWLI SLLSFFIIGL VVWVLEHRVN 600
  601 PDFDGPGQYQ LSTIFWFSFS IMVFAPRERV LSFWARVVVI IWYFLVLVLT QSYTASLASL 660
  661 LTTQHLHPTV TNINSLLAKG ESVGYQSSFI LGRLRDSGFS EASLVSYGSP EHCDALLSKG 720
  721 QAEGGVSAVL MEVPYVRIFL GQYCNKYKMV QTPFKVDGLG FVFPIGSPLV ADISRAILKV 780
  781 EESNKANQLE NAWFKPIDES CPDPLTNPDP NPSVSFRQLG FDSFWVLFLV AAIVCTMALL 840
  841 KFVYQFLKEN PNQRNLRVLW EKFNEPDQKS YIKDVTKCQC SSGQGMPKNG QEGANAVNNG 900
  901 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle