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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR13_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERFCIQTQT LLSFLLVLLL FISRSFASTK NDDVDGGKRV QIRVGLVLDL GSLKGKIVKN  60
   61 SVSMALSYFY AIHNDYKTRV SVSLRNSHGE PLLALASAVD LLKTEGVEAI IGGNSLLEAK 120
  121 LLGELGEKAR VPMISLDSPF SLSLSKYTHL IQATHDSTSE AKGITSFINV FDWNSVALVY 180
  181 EDHDDWRESM QLLVEHFHEN GVRVQSKVGF TVSSSEDFVM GRLQQLKDLG TTVFVVHLSE 240
  241 VIATHLFPCA RRLGLMGDGF VWILTAKTMN SFHENIDDFT KQAMEGVVGF KSYIPMSIEL 300
  301 QNFTLRWRKS LPVEEAELTR LSISGIWAHD IAFALARAAE VIRMPNVTST LLEEITKTRF 360
  361 NGLSGDFQLN DKKLLSNKFE IINMIGSSER RVGFLNSNGS FSNRRHLSST HNKLETIIWP 420
  421 GGSAQSPKGT SLIDSDRKKL RVLVTSSNRF PRLMKVETDP VTNELIVEGF CIEVFRASIS 480
  481 PFNYEVEYIP WLNGSNYDNL AYALHSQKDK YDAAVGDITI TSNRSTYVDF TLPFTEMGLG 540
  541 IVAVKERSMW VFFQPLTPDL WITSAFFFVL TGVIVWLIER AENKEFQGSW PQQIGVVLWF 600
  601 GFSTLVYAHR EKLKHNLSRF VVTVWVFAVL ILTASYTATL TSMMTVQQIR FNSNEDYVGH 660
  661 LSGSLIANVA LTSSSLRAMR SLGLNSAADY AQALLNKTVS FVVDELPYLK VVLGENPTHF 720
  721 FMVKTQSTTN GFGFMFQKGF ELVPNVSREI SKLRTSEKLN EMEKRWFDNQ LPYTTDDTSN 780
  781 PITLYRFRGL FIIIGVSFAF ALAVLVILCL RDKWEILVDN LDLSQRLRHF RIHFVRSIHT 840
  841 SPLDDPIGET AVQMAQQNRQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle