YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLR11_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEILFSISIL ALLFSGVVAA PSDDDVFEEV RVGLVVDLSS IQGKILETSF NLALSDFYGI  60
   61 NNGYRTRVSV LVRDSQGDPI IALAAATDLL KNAKAEAIVG AQSLQEAKLL ATISEKAKVP 120
  121 VISTFLPNTL SLKKYDNFIQ WTHDTTSEAK GITSLIQDFS CKSVVVIYED ADDWSESLQI 180
  181 LVENFQDKGI YIARSASFAV SSSGENHMMN QLRKLKVSRA SVFVVHMSEI LVSRLFQCVE 240
  241 KLGLMEEAFA WILTARTMNY LEHFAITRSM QGVIGFKSYI PVSEEVKNFT SRLRKRMGDD 300
  301 TETEHSSVII GLRAHDIACI LANAVEKFSV SGKVEASSNV SADLLDTIRH SRFKGLSGDI 360
  361 QISDNKFISE TFEIVNIGRE KQRRIGLWSG GSFSQRRQIV WPGRSRKIPR HRVLAEKGEK 420
  421 KVLRVLVTAG NKVPHLVSVR PDPETGVNTV SGFCVEVFKT CIAPFNYELE FIPYRGNNDN 480
  481 LAYLLSTQRD KYDAAVGDIT ITSNRSLYVD FTLPYTDIGI GILTVKKKSQ GMWTFFDPFE 540
  541 KSLWLASGAF FVLTGIVVWL VERSVNPEFQ GSWGQQLSMM LWFGFSTIVF AHREKLQKMS 600
  601 SRFLVIVWVF VVLILTSSYS ANLTSTKTIS RMQLNHQMVF GGSTTSMTAK LGSINAVEAY 660
  661 AQLLRDGTLN HVINEIPYLS ILIGNYPNDF VMTDRVTNTN GFGFMFQKGS DLVPKVSREI 720
  721 AKLRSLGMLK DMEKKWFQKL DSLNVHSNTE EVASTNDDDE ASKRFTFREL RGLFIIAGAA 780
  781 HVLVLALHLF HTRQEVSRLC TKLQSFYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle