YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPX3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSSRWVNQ RATSKIKKFI LFLGVAFVFY LYRYPSSPST VEQSSTSIYN ISVKDIEGKD  60
   61 VSLSKFTGKV LLIVNVASKC GLTHGNYKEM NILYAKYKTQ GFEILAFPCN QFGSQEPGSN 120
  121 MEIKETVCNI FKAEFPIFDK IEVNGKNTCP LYNFLKEQKG GLFGDAIKWN FAKFLVDRQG 180
  181 NVVDRYAPTT SPLEIEKDIV KLLASA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.91
Transmembrane Helix	16	34	0.85
Non-Cytoplasmic	35	206	0.99