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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GORK_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLRRRQEI IDHEEEESND DVSSRRGKLS LAETFRWLDS SEHRRIETDG HNDYKYIIHP  60
   61 KNRWYKAWEM FILVWAIYSS LFTPMEFGFF RGLPERLFVL DIVGQIAFLV DIVLQFFVAY 120
  121 RDTQTYRTVY KPTRIAFRYL KSHFLMDFIG CFPWDLIYKA SGKHELVRYL LWIRLFRVRK 180
  181 VVEFFQRLEK DTRINYLFTR ILKLLFVEVY CTHTAACIFY YLATTLPPEN EGYTWIGSLK 240
  241 LGDYSYENFR EIDLWKRYTT ALYFAIVTMA TVGYGDIHAV NLREMIFVMI YVSFDMVLGA 300
  301 YLIGNITALI VKGSNTERFR DKMNDLISFM NRKKLGRDLR SQITGHVRLQ YDSHYTDTVM 360
  361 LQDIPASIRA KIAQLLYLPY IKKVPLFKGC STEFINQIVI RLHEEYFLPG EVITEQGNVV 420
  421 DHLYFVCEGL LEALVTKTDG SEESVTLLGP HTSFGDISII CNISQPFTVR VCELCHLLRL 480
  481 DKQSFSNILE IYFHDGRTIL NNIMEEKESN DRIKKLESDI VIHIGKQEAE LALKVNSAAF 540
  541 QGDFYQLKSL IRSGADPNKT DYDGRSPLHL AACRGYEDIT LFLIQEGVDV NLKDKFGHTP 600
  601 LFEAVKAGQE GVIGLLVKEG ASFNLEDSGN FLCTTVAKGD SDFLKRLLSS GMNPNSEDYD 660
  661 HRTPLHVAAS EGLFLMAKML VEAGASVISK DRWGNSPLDE ARLCGNKKLI KLLEDVKNAQ 720
  721 SSIYPSSLRE LQEERIERRK CTVFPFHPQE AKEERSRKHG VVVWIPSNLE KLIVTAAKEL 780
  781 GLSDGASFVL LSEDQGRITD IDMISDGHKL YMISDTTDQT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle