YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLT3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHISQISSF LSIVLIFLAL CITLFTNPTL SLPALKLNPF QDFCVADLQA TPTNSGYPCK  60
   61 SQVTSEDFFY SGLNTPLNTS NPKGIAANPA NLLTFPGLNT LGISMYNVAI APGGYNQPHS 120
  121 HPGVTEAGVV IEGSVLVGFL TTNYTLYSKV IGPGDMFVIP PGLIHYEGNV GKTQCRLLTV 180
  181 VADDLPSEVG VPHTLLATKP AIPNEVLISA FKADSKTINM LRSKFTA

Type	Start	End	Confidence
Signal Peptide	1	31	0.87
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	227	0.96