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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLQ2_ARATH, GLPQ...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLLRASSL LLCGVILIQL LAAQIHAQSK KPKSPWPTLT GDPPLVIARG GFSGLFPDSS  60
   61 YDAYNFAILT SVPDAVLWCD VQLTKDALGI CFPDLTMRNS SSIEAVYPTR QKSYPVNGVP 120
  121 TSGWFTIDFS LKDLKDVNLI RGILSRSKKF DGNSNPIMTV QSVSTQMKPS FFWLNVQHDA 180
  181 FYAQHNLSMS SFLVAASKTV LIDFISSPEV NFFKKIAGRF GRNGPSLVFR FLGQDEFEPT 240
  241 TNRTYGSILS NLTFVKTFAS GILVPKSYIL PLDDQQYLLP HTSLVQDAHK AGLEVFVSGF 300
  301 ANDIDIAHDY SFDPVSEYLS FVDNGNFSVD GVLSDFPITA SASLDCFSHV GRNATKQVDF 360
  361 LVITKDGASG DYPGCTDLAY KKAIKDGADV IDCSVQLSSD GTPFCLSSID LGNSTTVSLT 420
  421 AFRNRSTTVP ELGSLGAIYT FSLTWAEIQT LTPAISNPYR VTSLFRNPKQ KNAGKLFSLS 480
  481 DFLSLAKNST SLSGVLISVE NAAYLREEQG LDVVKAVLDT LTQTGYSNST ATKVMIQSTN 540
  541 SSVLVDFKKQ SQYETVYKVE ENIRDILDSA IEDIKKFADA VVIQKLSVFP VAQSFITTQT 600
  601 NVVEKLQKSQ LPVYVELFQN EFLSQPYDFF ADATVEINSY ITGAGINGTI TEFPFTAARY 660
  661 KRNLCLGRKE TIPYMAPAQP GALLTLVSPT AFPPAEAPNP VFTDADVTEP PLPPVTAKAP 720
  721 TSSPGTPSTN AQAPSGQTRI TLSLLLSVFA MVLASLLLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle