YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GL110_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKSLSFLA ALSLLALTLP LTIASDPSQL QDFCVSANSS ANGVFVNGKF CKDPKLVTAD  60
   61 DFFFPGLQTA RPITSPVGST VTAVNVNNLL GLNTLGISLV RIDYAVDGQN PPHTHPRATE 120
  121 ILVVELGTLL VGFVTSNPDN RLFTKVLNEG DVFVFPEGLI HFQANIGKAP AVAFAALSSQ 180
  181 NPGVITIAPT VFGANPAINP NILAKAFQVD PRVVMDLQTK FKK

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	223	0.99