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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FUT5_ARATH
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQKFQISGK IVKTLGLKMK VLIAVSFGSL LFILSYSNNF NNKLLDATTK VDIKETEKPV  60
   61 DKLIGGLLTA DFDEGSCLSR YHKYFLYRKP SPYKPSEYLV SKLRSYEMLH KRCGPDTEYY 120
  121 KEAIEKLSRD DASESNGECR YIVWVAGYGL GNRLLTLASV FLYALLTERI ILVDNRKDVS 180
  181 DLLCEPFPGT SWLLPLDFPM LNYTYAWGYN KEYPRCYGTM SEKHSINSTS IPPHLYMHNL 240
  241 HDSRDSDKLF VCQKDQSLID KVPWLIVQAN VYFVPSLWFN PTFQTELVKL FPQKETVFHH 300
  301 LARYLFHPTN EVWDMVTDYY HAHLSKADER LGIQIRVFGK PDGRFKHVID QVISCTQREK 360
  361 LLPEFATPEE SKVNISKTPK LKSVLVASLY PEFSGNLTNM FSKRPSSTGE IVEVYQPSGE 420
  421 RVQQTDKKSH DQKALAEMYL LSLTDNIVTS ARSTFGYVSY SLGGLKPWLL YQPTNFTTPN 480
  481 PPCVRSKSME PCYLTPPSHG CEADWGTNSG KILPFVRHCE DLIYGGLKLY DEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle