YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FRI3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKAASTFS LLNIHGEKKD ISPLFSSSSS ISSPVSSGKS GNLSFPLRAS KSSTTTTSTL  60
   61 SGVVFEPFEE VKKEMDLVPS GQQLSLARHL YSPECEAAVN EQINVEYNVS YVYHALYAYF 120
  121 DRDNVALKGL AKFFKESSVE EREHAELLME YQNKRGGRVK LQPMVLPQSE FDHPEKGDAL 180
  181 YAMELALSLE KLVNEKLLNL HSVASKNDDV QLADFIESVF LNEQVEAIKK ISEYVSQLRR 240
  241 LGKGHGTWHF DQELLGAAA

Type	Start	End	Confidence
Signal Peptide	1	16	0.75
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	259	0.99