YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FRI2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHKASPALS LLSSGYTGGG NLFPPSRNSS NLLFSPSGSR FSVQAAKGTN TKSLTGVVFE  60
   61 PFEEVKKEME LVPTTPFVSL ARHKFSDDSE SAINDQINVE YNVSYVYHAL YAYFDRDNVG 120
  121 LKGFAKFFND SSLEERGHAE MFMEYQNKRG GRVKLQSILM PVSEFDHEEK GDALHAMELA 180
  181 LSLEKLTNEK LLKLQSVGVK NNDVQLVDFV ESEFLGEQVE AIKKISEYVA QLRRIGKGHG 240
  241 VWHFDQMLLN DEV

Type	Start	End	Confidence
Signal Peptide	1	19	0.86
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	253	0.99