YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FK163_ARATH
Protein type:	Transmembrane
Type Confidence:	0.52
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV  60
   61 LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP MVTTESGLQY KDIKVGRGPS 120
  121 PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY 180
  181 IPGPLAFPKG LVSAPGRPRV APNSPVIFDV SLEFIPGLDS EEE

Type	Start	End	Confidence
Cytoplasmic	1	55	0.51
Transmembrane Helix	56	77	0.51
Non-Cytoplasmic	78	223	0.96