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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EXTN1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFLVLAFS LAFVSQTTAN YFYSSPPPPV KHYSPPPVYK SPPPPVKHYS PPPVYKSPPP  60
   61 PVKHYSPPPV YKSPPPPVKY YSPPPVYKSP PPPVYKSPPP PVKHYSPPPV YKSPPPPVKH 120
  121 YSPPPVYKSP PPPVKHYSPP PVYKSPPPPV KHYSPPPVYK SPPPPVKYYS PPPVYKSPPP 180
  181 PVKHYSPPPV YKSPPPPVKY YSPPPVYKSP PPPVKHYSPP PVYKSPPPPV KYYSPPPVYK 240
  241 SPPPPVHYSP PPVVYHSPPP PVHYSPPPVV YHSPPPPVHY SPPPVVYHSP PPPVHYSPPP 300
  301 VVYHSPPPPV HYSPPPVVYH SPPPPKKHYE YKSPPPPVHY SPPTVYHSPP PPVHHYSPPH 360
  361 QPYLYKSPPP PHY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle