YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPA9_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKVITFMA VMVVTAFTAN AKIPGVYTGG PWINAHATFY GEADASGTMG GACGYGNLYS  60
   61 QGYGVNTAAL STALFNNGLS CGSCFELKCI NDPGWCLPGN PSILITATNF CPPNFNQASD 120
  121 NGGWCNPPRE HFDLAMPMFL SIAKYKAGIV PVSYRRIPCR KKGGIRFTIN GFKYFNLVLV 180
  181 TNVAGAGDVI KVSVKGSNTQ WLDLSRNWGQ NWQSNALLVG QSLSFRVKTS DGRSSTSNNI 240
  241 APSNWQFGQT YSGKNFRV

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	258	0.99