YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPA8_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTPSYLKYS IISIISVLFL QGTHGDDGGW QGGHATFYGG EDASGTMGGA CGYGNLYGQG  60
   61 YGTNTAALST ALFNNGLTCG ACYEMKCNDD PRWCLGSTIT VTATNFCPPN PGLSNDNGGW 120
  121 CNPPLQHFDL AEPAFLQIAQ YRAGIVPVSF RRVPCMKKGG IRFTINGHSY FNLVLISNVG 180
  181 GAGDVHAVSI KGSKTQSWQA MSRNWGQNWQ SNSYMNDQSL SFQVTTSDGR TLVSNDVAPS 240
  241 NWQFGQTYQG GQF

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	253	0.99