YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPA6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLGLVLSV LTTILALSEA RIPGVYNGGG WETAHATFYG GSDASGTMGG ACGYGNLYSQ  60
   61 GYGVNTAALS TALFNNGFSC GACFELKCAS DPKWCHSGSP SIFITATNFC PPNFAQPSDN 120
  121 GGWCNPPRPH FDLAMPMFLK IAEYRAGIVP VSFRRVPCRK RGGIRFTING FRYFNLVLVT 180
  181 NVAGAGNIVR LGVKGTHTSW MTMSRNWGQN WQSNSVLVGQ SLSFRVTSSD RRSSTSWNIA 240
  241 PANWKFGQTF MGKNFRV

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	257	0.98