YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPA5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLVISLLV VHLLAFSVCV QGGYRRGGHH PGGHMGPWIN AHATFYGGGD ASGTMGGACG  60
   61 YGNLYSQGYG LETAALSTAL FDQGLSCGAC FELMCVNDPQ WCIKGRSIVV TATNFCPPGG 120
  121 ACDPPNHHFD LSQPIYEKIA LYKSGIIPVM YRRVRCKRSG GIRFTINGHS YFNLVLVTNV 180
  181 GGAGDVHSVS MKGSRTKWQL MSRNWGQNWQ SNSYLNGQSL SFVVTTSDRR SVVSFNVAPP 240
  241 TWSFGQTYTG GQFRY

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	255	0.99