YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXLA1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA  60
   61 AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK SNQTDLVLSS RAFRAMAKPI 120
  121 VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID 180
  181 IAQVGSSPNW GYMTRSHGAV WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK 240
  241 IYDAGVQITD IAQEGCDPCD AHIWN

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	265	0.99