YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPB5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLKCFS FIVVLTTFFA ISLKPCYCHN KTHWNTAGIT WYGDREGPGT TGGACGYGDA  60
   61 VAKHPYRCMV SAGGPSLFKD GKGCGACYRL KCDHPLCTKK PIKVMISDEC PGCTKESVHF 120
  121 DLSGKAFGAL AKRGKGDQLR NLGELKVSYK RACCKHPKTM IAIHVDAGAN PYYMSFAVKF 180
  181 ANGDGNFACI EVQPAGGQYM KMEEMRSAVW RLSPGVPLKG PFNIRLTSAV SGKKIIAKGV 240
  241 IPEKWSPGAI YHSKVNFPVQ RKQK

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	264	0.99