YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPB2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG  60
   61 YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC YQVKCTSKSA CSKNPVTVVI 120
  121 TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD 180
  181 KGSNANSFAV LVAYVNGDGE IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL 240
  241 RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Type	Start	End	Confidence
Signal Peptide	1	29	0.75
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	273	0.95