YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP26_ARATH
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLEKMIYV EFLMIIMAMW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDPNWYD  60
   61 ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL FNDGYTCGAC YEIMCTRDPQ 120
  121 WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP 180
  181 CSKTGGVKFE TKGNPYFLMV LIYNVGGAGD IKYVQVKENK TGWITMKKNW GQNWTTSTVL 240
  241 TGQGLSFRVT TTDGITKDFW NVMPKNWGFG QTFDGKINF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.75
Transmembrane Helix	8	30	0.72
Non-Cytoplasmic	31	279	0.84