YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP25_ARATH
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLEQMVYV ECFMIIMATL LVSMSYGHRA MINDVAEAPV IDNVGSPTNG LDSSWYDARA  60
   61 TFYGDIHGGE TQQGACGYGD LFKQGYGLET AALSTALFNE GYTCGACYQI MCVHDPQWCL 120
  121 PGTIKITATN FCPPDYSKTE GVWCNPPQKH FDLSLPMFLK IAQYKAGVVP VKYRRISCAR 180
  181 TGGVKFETKG NPYFLMILPY NVGGAGDIKL MQVKGDKTGW ITMQKNWGQN WTTGVNLTGQ 240
  241 GISFRVTTSD GVTKDFNNVM PNNWGFGQTF DGKINF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.44
Transmembrane Helix	7	28	0.50
Non-Cytoplasmic	29	276	0.88