YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EX22_ARATH, EXP2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYVEFLMII MVIWVVPMSY GHGAMIGNAV EAPDVAEAPG INDPSKALDT NWYDARATFY  60
   61 GDIHGGDTQQ GACGYGNLFR QGYGLATAAL STALFNDGYT CGACYEIMCT RDPQWCLPGS 120
  121 VKITATNFCP ANYSKTTDLW CNPPQKHFDL SLAMFLKIAK YKAGVVPVRY RRIPCSKTGG 180
  181 VKFETKGNPY FLMVLIYNVG GAGDIKYVQV KGNKTGWITM KKNWGQNWTT ITVLTGQGLS 240
  241 FRVTTSDGIT KDFWNVMPKN WGFGQTFDGR INF

Type	Start	End	Confidence
Signal Peptide	1	21	0.60
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	273	0.91