YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP18_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQNLYRKCL VILSMMAMIG TSMATYAGTP WRTASATFYG DDTGSATMGG ACGYGNMYDS  60
   61 GYGVATTALS TALFNEGYAC GQCFQLKCVS SPNCYYGSPA TVVTATNICP PNYGQASNNG 120
  121 GWCNPPRVHF DLTKPAFMKI ANWKAGIIPV SYRRVACKKI GGIRFKFEGN GYWLLVYVMN 180
  181 VGGPGDIKTM AVKGSRTGWI NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAYNAA 240
  241 PASWSAGKTY QSKANFN

Type	Start	End	Confidence
Signal Peptide	1	24	0.79
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	257	0.95