YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP14_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFFGKMIIS LSLMMMIMWK SVDGYSSGWV NARATFYGGA DASGTMGGAC GYGNLYSQGY  60
   61 GTNTAALSTA LFNGGQSCGA CFQIKCVDDP KWCIGGTITV TGTNFCPPNF AQANNAGGWC 120
  121 NPPQHHFDLA QPIFLRIAQY KAGVVPVQYR RVACRRKGGI RFTINGHSYF NLVLITNVAG 180
  181 AGDVISVSIK GTNTRWQSMS RNWGQNWQSN AKLDGQALSF KVTTSDGRTV ISNNATPRNW 240
  241 SFGQTYTGKQ FRAQR

Type	Start	End	Confidence
Signal Peptide	1	24	0.49
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	255	0.85