YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP13_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFLLPLLF LALSPPAICH YSSSTSSPSS SSVSSDASEW RPARATYYAA TNPRDAVGGA  60
   61 CGYGDLVKSG YGMATVGLSE TLFERGQICG ACFELRCVDD LRWCIPGTSI ILTATNFCAP 120
  121 NYGFDPDGGG HCNPPNKHFV LPIEAFEKIA IWKAGNMPVQ YRRINCRKEG SMRFTVDGGG 180
  181 IFISVLITNV AGSGDIAAVK IKGSRTGWLP MGRNWGQNWH INADLRNQAL SFEVTSSDRS 240
  241 TVTSYNVSPK NWNYGQTFEG KQFETP

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	266	0.98