YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP12_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGGACGY DNPYHAGFGA  60
   61 HTAALSGELF RSGESCGGCY QVRCDFPADP KWCLRGAAVT VTATNFCPTN NNNGWCNLPR 120
  121 HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS 180
  181 VRSVAVRGSK GKTWLQMTRN WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF 240
  241 GQTFSSRGRQ FV

Type	Start	End	Confidence
Signal Peptide	1	23	0.88
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	252	0.94