YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXP10_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHLGFLVMI MVGVMASSVS GYGGGWINAH ATFYGGGDAS GTMGGACGYG NLYSQGYGTS  60
   61 TAALSTALFN NGLSCGSCFE IRCENDGKWC LPGSIVVTAT NFCPPNNALA NNNGGWCNPP 120
  121 LEHFDLAQPV FQRIAQYRAG IVPVSYRRVP CRRRGGIRFT INGHSYFNLV LITNVGGAGD 180
  181 VHSAAIKGSR TVWQAMSRNW GQNWQSNSYL NGQALSFKVT TSDGRTVVSF NAAPAGWSYG 240
  241 QTFAGGQFR

Type	Start	End	Confidence
Signal Peptide	1	21	0.79
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	249	0.87