YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EBP_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEELAHPYVP RDLNLPGYVP ISMSMSSIVS IYLGSSLLVV SLVWLLFGRK KAKLDKLLMC  60
   61 WWTFTGLTHV ILEGYFVFSP EFFKDNTSAY LAEVWKEYSK GDSRYVGRDS AVVSVEGITA 120
  121 VIVGPASLLA IYAIAKEKSY SYVLQLAISV CQLYGCLVYF ITAILEGDNF ATNSFYYYSY 180
  181 YIGANCWWVL IPSLISFRCW KKICAAAAIA NNNVETKTKK KTR

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.94
Transmembrane Helix	25	47	0.91
Cytoplasmic	48	57	0.89
Transmembrane Helix	58	78	0.93
Non-Cytoplasmic	79	112	0.96
Transmembrane Helix	113	134	0.91
Cytoplasmic	135	141	0.88
Transmembrane Helix	142	164	0.92
Non-Cytoplasmic	165	176	0.89
Transmembrane Helix	177	200	0.83
Cytoplasmic	201	223	0.98